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Cottage Cheese Blueberry Muffins

December 12, 2024 by Leanne Neill 2 Comments

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These fluffy, tender, cottage cheese blueberry muffins, are bursting with juicy blueberries and a sneaky protein boost from the cottage cheese—though you’d never guess it’s there! They are perfect for busy mornings, after-school snacks 🏫, post-game treats ⚽, coffee breaks 🍵, or road trips 🛣️ to name a few. They’re easy to take on the go and sure to be a hit with everyone. What’s not to love?

side shot of two cottage cheese blueberry muffins on a small white plate.  One muffin has been pulled apart and is sitting atop the other muffin on the plate.  You can see lots of blueberries inside the muffin.  In the background there are more muffins and fresh blueberries scattered about.

Making high domed muffin tops is something a lot of people are interested in. I discussed a few tips that will help you achieve beautiful muffin tops in my Banana Chocolate Chunk Muffin recipe. You can read these high domed muffin top tips here. I like to make muffins for my kids’ lunch treats. They freeze well, and then I just pop a frozen muffin into their lunch bag, and its ready to go by lunch time.

EQUIPMENT NEEDED

Disclosure: as an Amazon affiliate, I receive a small amount of compensation from qualifying purchases at no expense to you. This helps support my work and allows me to bring more yummy recipes your way.

Most of the equipment I used in making these cottage cheese blueberry muffins you will probably already have in your kitchen, but here are some helpful links if you need to stock up your kitchen.

  • Mixing bowls
  • Measuring Cups
  • Measuring Spoons
  • Cooling Rack
  • Muffin Tin
  • Muffin Liners
  • Cookie Scoop – to get a nice full measured amount of batter into each muffin liner

INGREDIENTS

Overhead shot of ingredients needed to make cottage cheese blueberry muffins.  Ingredients are: fresh blueberries, milk, cottage cheese, baking powder, baking soda, salt, flour, vanilla, eggs, cinnamon, sugar and oil
  • 1 3/4 cups all-purpose flour (253g)
  • 3/4 cup sugar (154g)
  • 1 teaspoon baking powder
  • 1/2 teaspoon baking soda
  • 1/2 teaspoon cinnamon
  • 1/4 teaspoon salt
  • 1/2 cup milk
  • 1 cup cottage cheese
  • 1/4 cup vegetable oil
  • 2 large eggs, slightly beaten
  • 1 teaspoon vanilla
  • 1 1/4 cups blueberries

DIRECTIONS FOR MAKING BLUEBERRY COTTAGE CHEESE MUFFINS

Combine all the dry ingredients (flour, sugar, baking powder, baking soda, cinnamon, and salt) into a bowl and mix together, then set aside.

Combine all the wet ingredients (milk, cottage cheese, oil, eggs, vanilla) in another bowl and mix together.

Pour the wet ingredients into the dry ingredients. Use a large spoon to gently mix the batter. You don’t want to overmix it, just until everything is combined. Cover the bowl with plastic wrap and let it sit for 30-60 min. This allows enough time for the gluten to relax which aids in a nicely risen muffin top and makes your muffins more tender.

Three overhead pictures side by side.  The first picture shows the dry ingredients mixed together in a glass mixing bowl.  The second picture shows a yellow liquid of all the wet ingredients mixed together in a glass bowl.  And the third picture shows a glass bowl of the batter after the wet and dry ingredients have been combined.

Preheat oven to 425F

Roll your clean and dry blueberries in a little bit of flour just to give them a gentle coating. See Note 1. This helps to prevent the blueberries from sinking to the bottom of your muffin during baking.

Add the lightly floured blueberries to the batter and gently fold in.

Overhead shot of two pictures side by side.  The picture on the left  is the cottage cheese blueberry muffin batter in a glass bowl with the lightly floured blueberries on top.  The picture on the right is the batter after the blueberries have been folded in.

Line a 12-muffin muffin tin with 6 liners, lightly sprayed with oil, so that every other space is empty. See Note 2.

Using a large cookie scoop if you have one, scoop the batter into the liners filling them nearly to the top.

You can add a few extra blueberries to the top for decoration, but I find if they aren’t at least half submerged in the batter, they tend to bleed all over the muffin, so poke them down a little if adding.

Overhead shot of two muffin pans side by side.  The muffin pan on the left has every other hole filled with blueberry cottage cheese muffin batter.  The muffin tin on the right is the same tin as on the left but after the muffins have been baked.

Place in the 425F oven for 7 minutes. Then turn the oven down to 350F and bake for another 15-20 minutes, until they are nicely browned and a toothpick comes out clean (when not poked into a blueberry). See Note 3.

Allow to cool in the muffin tin until you can remove them to a baking rack to cool further. Serve warm or at room temperature – Enjoy!

A side shot of a cottage cheese blueberry muffin with it's wraper undone and the muffin is sitting atop of it.  There or more muffins in the background along with a bowl of blueberries.  There are also some blueberries scattered around the muffin.

NOTES

  1. Rolling blueberries in a little bit of flour just to give them a gentle coating before adding to the batter helps to prevent the blueberries from sinking to the bottom of your muffin during baking.
  2. Filling the muffin pan in every other muffin hole will allow for better heat circulation around individual muffins leading to a better rise for each muffin.
  3. Placing the muffins initially in a hot oven at 425F for 7 minutes helps promote a high domed muffin top.

FAQs

Can I substitute another fruit for the blueberries? Yes, for sure. Straight substitutions that will work would be raspberries, blackberries, cut up strawberries etc. I would avoid any fruit that has a significantly higher moisture content than these fruits otherwise you might have to alter the amount of milk you add to the recipe.

What if I don’t like cinnamon? This is a spice you can leave out if you prefer.

How should I store leftovers? Like most baked goods, they taste best the day they are made. But you can store them in an air-tight container on the counter for up to three days or in the fridge for up to five days. You can also freeze them in a ziploc bag or air-tight container for up to three months in the freezer.

If You Liked This Cottage Cheese Blueberry Muffin Recipe…

If you liked this recipe, please consider rating the recipe and leaving a comment below – I love to hear how people get on with my recipes and I truly make an effort to respond to everyone who takes the time to comment. Other recipes you might enjoy include:

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side shot of two cottage cheese blueberry muffins on a small white plate. One muffin has been pulled apart and is sitting atop the other muffin on the plate. You can see lots of blueberries inside the muffin. In the background there are more muffins and fresh blueberries scattered about.

Cottage Cheese Blueberry Muffins

Leanne Neill
Fluffy, tender muffins with perfectly golden tops, bursting with juicy blueberries and a sneaky protein boost from cottage cheese—though you'd never guess it's there! These delightful muffins are perfect for busy mornings, after-school snacks, post-game treats, coffee breaks, or road trips to name a few. They’re easy to take on the go and sure to be a hit with everyone. What's not to love?
5 from 1 vote
Print Recipe Pin Recipe
Prep Time 10 minutes mins
Cook Time 27 minutes mins
Total Time 37 minutes mins
Course Breakfast, Dessert, Snack
Cuisine American
Servings 11 Muffins

Ingredients
  

  • 1 3/4 cups all-purpose flour (253g)
  • 3/4 cup sugar (154g)
  • 1 teaspoon baking powder
  • 1/2 teaspoon baking soda
  • 1/2 teaspoon cinnamon
  • 1/4 teaspoon salt
  • 1/2 cup milk
  • 1 cup cottage cheese
  • 1/4 cup vegetable oil
  • 2 large eggs
  • 1 teaspoon vanilla
  • 1 1/4 cups fresh blueberries washed and dry

Instructions
 

  • Add dry ingredients to a bowl (flour, sugar, baking powder, baking soda, cinnamon, salt) and stir to combine. Set the bowl aside.
  • Add wet ingredients together (milk, cottage cheese, oil, eggs, and vanilla) and mix well.
  • Add wet ingredients to dry ingredients and gently fold the batter together with a large spoon until just combined. Don't overmix.
  • Cover the bowl with plastic wrap and let sit for 30-60 minutes. See Note 1.
  • Preheat oven to 425F
  • Add a tablespoon or two of all-purpose flour to a bowl and then add in the clean and dry blueberries. Roll them around to lightly coat with the flour. See Note 2.
  • Fill a 12-muffin muffin tin with 6 oiled muffin liners so that every other space is left empty. See Note 3.
  • Fill each muffin liner until it is almost full with batter. You can add a few extra blueberries to the top for decoration, but be sure to poke it down at least half submerged to prevent excessive bleeding when baking.
  • Place in the 425F oven and bake for 7 minutes. Turn the oven down to 350F and bake for another 20 minutes or until the tops are a nice golden brown and a toothpick comes out clean (when not poked into a blueberry).
  • Let cool in the muffin pan until you can place each muffin on a baking rack where they can finish cooling. Serve warm or at room temperature, enjoy!

Notes

  1. Rolling blueberries in a little bit of flour just to give them a gentle coating before adding to the batter helps to prevent the blueberries from sinking to the bottom of your muffin during baking.
  2. Filling the muffin pan in every other muffin hole will allow for better heat circulation around individual muffins leading to a better rise for each muffin.
  3. Placing the muffins initially in a hot oven at 425F for 7 minutes helps promote a high domed muffin top.
Keyword Blueberry Muffin, Blueberry Muffins, Cottage Cheese Blueberry Muffin, Cottage Cheese Blueberry Muffins
Side shot of a vertically cut open blueberry cottage cheese muffin stacked on top of another whole muffin.  Inside there are lots of dark blue blueberries present.  More muffins are in the background.

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Filed Under: Breakfast, Desserts/Baking Tagged With: blueberry cottage cheese muffin, Blueberry Cottage Cheese Muffins, Cottage cheese blueberry muffin, Muffin

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Comments

  1. Eva

    October 11, 2025 at 7:26 am

    5 stars
    I am always looking for new ways to add cottage cheese into my day, so I was so pumped to fins this recipe. Can’t wait to try it.

    Reply
    • Leanne Neill

      October 21, 2025 at 1:50 pm

      Hi Eva, yes cottage cheese is a great protein source and this is a great recipe to sneak in a little more protein.

      Reply

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